Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 MIR4281-201ENST00000580852 62 ntBASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.29■□□□□ 0.2
TRGV4A0A0C4DH28 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV4A0A0C4DH28 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRGV4A0A0C4DH28 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
TRGV4A0A0C4DH28 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRGV4A0A0C4DH28 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV4A0A0C4DH28 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV4A0A0C4DH28 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV4A0A0C4DH28 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV4A0A0C4DH28 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.27■□□□□ 0.19
TRGV4A0A0C4DH28 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 AC103834.1-201ENST00000520383 144 ntBASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 AC103724.3-201ENST00000564481 992 ntBASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 AL031848.2-201ENST00000607670 837 ntBASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV4A0A0C4DH28 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV4A0A0C4DH28 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV4A0A0C4DH28 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV4A0A0C4DH28 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRGV4A0A0C4DH28 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.24■□□□□ 0.19
TRGV4A0A0C4DH28 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.24■□□□□ 0.19
TRGV4A0A0C4DH28 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV4A0A0C4DH28 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV4A0A0C4DH28 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV4A0A0C4DH28 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV4A0A0C4DH28 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.23■□□□□ 0.19
TRGV4A0A0C4DH28 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV4A0A0C4DH28 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.23■□□□□ 0.19
TRGV4A0A0C4DH28 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRGV4A0A0C4DH28 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRGV4A0A0C4DH28 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV4A0A0C4DH28 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRGV4A0A0C4DH28 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms