Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.9■□□□□ 0.3
IGKV3D-20A0A0C4DH25 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.9■□□□□ 0.3
IGKV3D-20A0A0C4DH25 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV3D-20A0A0C4DH25 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
IGKV3D-20A0A0C4DH25 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
IGKV3D-20A0A0C4DH25 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.89■□□□□ 0.3
IGKV3D-20A0A0C4DH25 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 AC090877.2-201ENST00000558441 1738 ntBASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 AC092068.2-201ENST00000590491 1708 ntBASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGKV3D-20A0A0C4DH25 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 DUSP8P3-201ENST00000399571 1760 ntBASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
IGKV3D-20A0A0C4DH25 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 AC009831.1-201ENST00000580420 1582 ntBASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGKV3D-20A0A0C4DH25 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 CLDN5-201ENST00000403084 2357 ntBASIC16.86■□□□□ 0.29
IGKV3D-20A0A0C4DH25 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 GPX1-201ENST00000419349 1106 ntBASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 AC133552.2-201ENST00000619106 1032 ntBASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 AL161729.1-201ENST00000604104 1402 ntBASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 EP400NL-214ENST00000641289 2402 ntBASIC16.85■□□□□ 0.29
IGKV3D-20A0A0C4DH25 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 C1orf229-201ENST00000623686 2258 ntBASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 RPS2P7-201ENST00000447334 885 ntBASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IGKV3D-20A0A0C4DH25 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
IGKV3D-20A0A0C4DH25 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
IGKV3D-20A0A0C4DH25 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IGKV3D-20A0A0C4DH25 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms