Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV8-3A0A0A6YYJ7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 AL033527.3-201ENST00000566366 1196 ntBASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-3A0A0A6YYJ7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms