Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 AC009108.4-201ENST00000623284 2451 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 GPX1P2-201ENST00000429271 606 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TSPY17P-201ENST00000450329 467 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 NUDT16P1-203ENST00000513809 620 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 AL450472.2-201ENST00000603663 1156 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 AC139887.4-201ENST00000607877 719 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 AL023973.1-201ENST00000624619 620 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 MARS-234ENST00000630571 216 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 MARS-235ENST00000630803 183 ntTSL 3 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 ZMYM5-201ENST00000337963 3268 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 POM121L7P-201ENST00000329949 2404 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 CTAGE13P-201ENST00000416709 2446 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TUBB8P4-201ENST00000511806 1324 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AL353692.3-201ENST00000407031 1396 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms