Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 AP002761.4-201ENST00000565433 3361 ntBASIC13.96□□□□□ -0.17
AP4S1Q9Y587 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 SERBP1P3-201ENST00000459980 809 ntBASIC13.96□□□□□ -0.17
AP4S1Q9Y587 RNA5SP416-201ENST00000516838 111 ntBASIC13.96□□□□□ -0.17
AP4S1Q9Y587 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 AL158070.2-201ENST00000623713 1621 ntBASIC13.96□□□□□ -0.17
AP4S1Q9Y587 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
AP4S1Q9Y587 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 AC093525.8-201ENST00000624099 1342 ntBASIC13.95□□□□□ -0.18
AP4S1Q9Y587 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 AC004870.1-201ENST00000315132 882 ntBASIC13.95□□□□□ -0.18
AP4S1Q9Y587 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 FAAHP1-202ENST00000446499 1238 ntBASIC13.95□□□□□ -0.18
AP4S1Q9Y587 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 KHSRPP1-201ENST00000427983 1768 ntBASIC13.95□□□□□ -0.18
AP4S1Q9Y587 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4S1Q9Y587 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms