Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 AC012617.1-204ENST00000586340 2305 ntBASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
ERGIC3Q9Y282 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AL022323.5-201ENST00000624101 2059 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 FAM58CP-201ENST00000435741 640 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC004066.1-201ENST00000502488 802 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 RNA5SP419-201ENST00000515908 135 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC018529.1-201ENST00000613063 361 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 MIR6069-201ENST00000620069 79 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AC111170.3-201ENST00000624282 2464 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 MIR193BHG-211ENST00000641433 5365 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 AL365181.3-201ENST00000605886 3222 ntBASIC13.51□□□□□ -0.25
ERGIC3Q9Y282 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 BX324167.2-201ENST00000623717 3316 ntBASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ERGIC3Q9Y282 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms