Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 MME-218ENST00000625667 363 ntTSL 5 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 PDXDC2P-206ENST00000534700 1315 ntBASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 NT5C-204ENST00000578337 582 ntTSL 2 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHANK2Q9UPX8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 OR52M2P-201ENST00000414298 959 ntBASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SHANK2Q9UPX8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 AC073210.1-201ENST00000414799 232 ntBASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 PGAM1P12-201ENST00000505622 748 ntBASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 AL022313.4-201ENST00000562756 2046 ntBASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
SHANK2Q9UPX8 MSANTD2P1-201ENST00000445341 1368 ntBASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SHANK2Q9UPX8 AC113367.3-201ENST00000508316 1912 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms