Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRFN1Q9P244 CICP23-201ENST00000605013 2741 ntBASIC13.54□□□□□ -0.24
LRFN1Q9P244 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRFN1Q9P244 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRFN1Q9P244 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
LRFN1Q9P244 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRFN1Q9P244 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LRFN1Q9P244 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.53□□□□□ -0.24
LRFN1Q9P244 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 AC125604.1-201ENST00000496255 707 ntBASIC13.53□□□□□ -0.24
LRFN1Q9P244 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 SNORD3B-2-202ENST00000571722 791 ntBASIC13.53□□□□□ -0.24
LRFN1Q9P244 MIR3619-201ENST00000579667 83 ntBASIC13.53□□□□□ -0.24
LRFN1Q9P244 AC005962.1-201ENST00000584100 773 ntBASIC13.53□□□□□ -0.24
LRFN1Q9P244 AP000346.4-201ENST00000614827 381 ntBASIC13.53□□□□□ -0.24
LRFN1Q9P244 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 CU633904.3-201ENST00000624042 1029 ntBASIC13.53□□□□□ -0.24
LRFN1Q9P244 MRPL37P1-201ENST00000592451 1337 ntBASIC13.53□□□□□ -0.24
LRFN1Q9P244 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 AL136172.1-201ENST00000598590 1394 ntBASIC13.53□□□□□ -0.24
LRFN1Q9P244 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.53□□□□□ -0.24
LRFN1Q9P244 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRFN1Q9P244 MBLAC2-202ENST00000514906 1936 ntBASIC13.52□□□□□ -0.24
LRFN1Q9P244 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LRFN1Q9P244 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.52□□□□□ -0.24
LRFN1Q9P244 AGAP7P-201ENST00000582299 2062 ntBASIC13.52□□□□□ -0.24
LRFN1Q9P244 AGAP14-201ENST00000624701 2060 ntBASIC13.52□□□□□ -0.24
LRFN1Q9P244 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRFN1Q9P244 AC013726.1-201ENST00000563747 2285 ntBASIC13.52□□□□□ -0.24
LRFN1Q9P244 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.52□□□□□ -0.24
LRFN1Q9P244 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.52□□□□□ -0.24
LRFN1Q9P244 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRFN1Q9P244 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRFN1Q9P244 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRFN1Q9P244 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LRFN1Q9P244 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.52□□□□□ -0.24
LRFN1Q9P244 AC126335.2-201ENST00000623362 4637 ntBASIC13.52□□□□□ -0.24
LRFN1Q9P244 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRFN1Q9P244 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.52□□□□□ -0.24
LRFN1Q9P244 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 AC092506.1-202ENST00000401022 528 ntBASIC13.52□□□□□ -0.25
LRFN1Q9P244 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 HLA-J-204ENST00000495278 958 ntBASIC13.52□□□□□ -0.25
LRFN1Q9P244 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 AC245884.6-201ENST00000515672 1067 ntBASIC13.52□□□□□ -0.25
LRFN1Q9P244 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 Z98259.2-201ENST00000641583 609 ntBASIC13.52□□□□□ -0.25
LRFN1Q9P244 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRFN1Q9P244 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LRFN1Q9P244 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms