Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 INTS4P1-203ENST00000641008 3683 ntBASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 AC011742.3-201ENST00000439053 820 ntBASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 MIR3619-201ENST00000579667 83 ntBASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 AL136295.7-201ENST00000619226 1200 ntBASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 AL805961.1-203ENST00000641078 1258 ntBASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 KHSRPP1-201ENST00000427983 1768 ntBASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20BQ9P0W2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 AC022447.6-201ENST00000515522 438 ntBASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms