Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AL079307.3-201ENST00000556114 283 ntBASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 BX640515.1-201ENST00000617215 977 ntBASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 LINC00628-201ENST00000628516 1289 ntBASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 FAM90A12P-201ENST00000519497 2375 ntBASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 FAM90A24P-201ENST00000520792 2369 ntBASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AC019294.4-201ENST00000561777 2905 ntBASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AC023794.5-201ENST00000564380 2157 ntBASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AL360270.3-201ENST00000609118 1348 ntBASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
SND1-IT1Q9HBX3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms