Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HDHD3Q9BSH5 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 AC011840.2-201ENST00000563063 1520 ntBASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 LRRC59-203ENST00000576448 1531 ntBASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 FAM90A12P-201ENST00000519497 2375 ntBASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 FAM90A24P-201ENST00000520792 2369 ntBASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 AC023794.5-201ENST00000564380 2157 ntBASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
HDHD3Q9BSH5 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 TCAM1P-207ENST00000485295 1537 ntBASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 MRPL37P1-201ENST00000592451 1337 ntBASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 AC106028.4-201ENST00000614509 607 ntBASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 AC008761.3-201ENST00000624803 892 ntBASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HDHD3Q9BSH5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms