Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AL844908.2-201ENST00000609461 460 ntBASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 AC011474.4-201ENST00000623523 2076 ntBASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMSS1Q9BQ75 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 AL138799.1-201ENST00000448213 1675 ntBASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 AC092865.5-201ENST00000545435 363 ntBASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 KRT8P22-201ENST00000562317 1415 ntBASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CMSS1Q9BQ75 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms