Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM47Q96LD4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 AL627231.1-201ENST00000394467 1125 ntBASIC17.23■□□□□ 0.35
TRIM47Q96LD4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 RN7SKP175-201ENST00000408472 289 ntBASIC17.23■□□□□ 0.35
TRIM47Q96LD4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 AC051619.9-201ENST00000623237 597 ntBASIC17.23■□□□□ 0.35
TRIM47Q96LD4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM47Q96LD4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 LINC01101-201ENST00000622953 1884 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 CICP23-201ENST00000605013 2741 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 SHC1P1-201ENST00000425230 1745 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 HLA-J-204ENST00000495278 958 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 AC026434.2-201ENST00000506094 1078 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 CTBP2P4-201ENST00000513884 920 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 DUX4L46-201ENST00000566845 751 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 AC103810.10-201ENST00000606504 343 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 AC007718.1-201ENST00000621078 280 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 AC002472.3-201ENST00000640124 621 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 AL645728.2-202ENST00000641679 227 ntBASIC17.22■□□□□ 0.35
TRIM47Q96LD4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM47Q96LD4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms