Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 ATP5G2P4-201ENST00000442175 420 ntBASIC12.92□□□□□ -0.34
TMEM54Q969K7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 AC010328.2-201ENST00000597698 1111 ntBASIC12.92□□□□□ -0.34
TMEM54Q969K7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 AC104506.1-201ENST00000609247 429 ntBASIC12.92□□□□□ -0.34
TMEM54Q969K7 AL162426.1-201ENST00000624141 743 ntBASIC12.92□□□□□ -0.34
TMEM54Q969K7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 TCAM1P-207ENST00000485295 1537 ntBASIC12.92□□□□□ -0.34
TMEM54Q969K7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 AC015818.8-201ENST00000587907 1519 ntBASIC12.92□□□□□ -0.34
TMEM54Q969K7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 FAM58BP-201ENST00000439056 645 ntBASIC12.91□□□□□ -0.34
TMEM54Q969K7 BNIP3P42-201ENST00000454982 569 ntBASIC12.91□□□□□ -0.34
TMEM54Q969K7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.91□□□□□ -0.34
TMEM54Q969K7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 AC100827.2-201ENST00000563214 1194 ntBASIC12.91□□□□□ -0.34
TMEM54Q969K7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 BNIP3P29-201ENST00000598302 571 ntBASIC12.91□□□□□ -0.34
TMEM54Q969K7 AC011447.5-201ENST00000616168 564 ntBASIC12.91□□□□□ -0.34
TMEM54Q969K7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM54Q969K7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TMEM54Q969K7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms