Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 GAPDHP40-201ENST00000505218 1006 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AL132655.2-201ENST00000596276 594 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 LINC02560-201ENST00000596379 459 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AC093726.1-201ENST00000608064 963 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AC008761.3-201ENST00000624803 892 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AC087499.6-201ENST00000411576 835 ntBASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 VDAC1P7-201ENST00000462417 847 ntBASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AC026410.3-201ENST00000514280 936 ntBASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 RN7SL204P-201ENST00000582831 262 ntBASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 BRI3BPP1-201ENST00000594224 787 ntBASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AC107373.2-201ENST00000607735 490 ntBASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AL662799.1-202ENST00000614205 422 ntBASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 TCAF1P1-201ENST00000414990 2232 ntBASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 AL359183.1-201ENST00000623796 2132 ntBASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RTN4IP1Q8WWV3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms