Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 AC004461.1-201ENST00000412461 403 ntBASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 AC254562.1-201ENST00000417586 456 ntBASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 CNN2P11-201ENST00000429351 262 ntBASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 AL353779.1-201ENST00000434793 351 ntBASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 METTL21AP1-201ENST00000438852 635 ntBASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 HLA-V-204ENST00000476601 1289 ntBASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 AC215219.1-201ENST00000400706 1817 ntBASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 PPT1-213ENST00000641319 2388 ntBASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 AC012617.1-204ENST00000586340 2305 ntBASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3IL1Q8TBN0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 RN7SL618P-201ENST00000477850 296 ntBASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 AL512361.1-201ENST00000554200 418 ntBASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 AC010336.2-201ENST00000564226 506 ntBASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 AP001059.3-201ENST00000619053 235 ntBASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 PTPRVP-205ENST00000641549 5067 ntBASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 AC073548.1-201ENST00000624088 1882 ntBASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3IL1Q8TBN0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 CLK3P2-201ENST00000427566 1453 ntBASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms