Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 KHSRPP1-201ENST00000427983 1768 ntBASIC13.81□□□□□ -0.2
NUP43Q8NFH3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NUP43Q8NFH3 AC136759.1-202ENST00000530858 2194 ntBASIC13.81□□□□□ -0.2
NUP43Q8NFH3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AC012617.1-204ENST00000586340 2305 ntBASIC13.8□□□□□ -0.2
NUP43Q8NFH3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AP003171.2-201ENST00000528208 925 ntBASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 KRT90P-201ENST00000549264 1064 ntBASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AC239800.4-201ENST00000603712 296 ntBASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NUP43Q8NFH3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms