Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.86□□□□□ -0.19
DEPDC4Q8N2C3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
DEPDC4Q8N2C3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
DEPDC4Q8N2C3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DEPDC4Q8N2C3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.86□□□□□ -0.19
DEPDC4Q8N2C3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
DEPDC4Q8N2C3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DEPDC4Q8N2C3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
DEPDC4Q8N2C3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 AC005034.1-201ENST00000426657 489 ntBASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 CRB3P1-201ENST00000449338 276 ntBASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 DOC2GP-202ENST00000514950 1163 ntBASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 AC044860.1-202ENST00000559481 777 ntBASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 AC008738.7-201ENST00000609744 511 ntBASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DEPDC4Q8N2C3 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 KRT8P24-201ENST00000560290 1559 ntBASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 AC016397.2-201ENST00000624848 1985 ntBASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 SPTLC1P1-201ENST00000447199 261 ntBASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 USP9YP2-201ENST00000504503 1000 ntBASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 AC093004.1-201ENST00000508850 424 ntBASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 USP9YP1-201ENST00000513521 1002 ntBASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.84□□□□□ -0.19
DEPDC4Q8N2C3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms