Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 E2F3P2-201ENST00000447755 1422 ntBASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 FAM45BP-202ENST00000592932 1624 ntBASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 AP005482.1-201ENST00000563722 1273 ntBASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 AL136301.1-201ENST00000615830 422 ntBASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 AC005089.1-201ENST00000619486 2241 ntBASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11FIP4Q86YS3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 AC100850.1-201ENST00000506768 649 ntBASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 AC023310.1-201ENST00000554836 735 ntBASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 AP001002.3-201ENST00000623482 206 ntBASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 AC027601.5-201ENST00000624065 2482 ntBASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11FIP4Q86YS3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms