Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 RPL18P13-201ENST00000478088 569 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 ZNF767P-206ENST00000513792 565 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AC044849.1-201ENST00000519737 1188 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AC008805.1-201ENST00000590892 364 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AC020914.3-201ENST00000594712 304 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AL451050.2-201ENST00000606967 682 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 MIR6787-201ENST00000616675 61 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AC244452.3-201ENST00000636814 210 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AGGF1P1-201ENST00000509500 2073 ntBASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LRRTM4Q86VH4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 DPM3-202ENST00000368399 517 ntBASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 NKAIN1P1-201ENST00000435754 582 ntBASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 AC013355.1-201ENST00000562625 723 ntBASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 MIR3615-201ENST00000581999 87 ntBASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 AP000346.4-201ENST00000614827 381 ntBASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 AC007326.2-201ENST00000624224 7579 ntBASIC14.42□□□□□ -0.1
LRRTM4Q86VH4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms