Protein–RNA interactions for Protein: Q6P435

Putative uncharacterized SMG1-like protein, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q6P435 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Q6P435 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Q6P435 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Q6P435 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.3□□□□□ -0.44
Q6P435 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.3□□□□□ -0.44
Q6P435 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Q6P435 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Q6P435 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.3□□□□□ -0.44
Q6P435 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Q6P435 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.3□□□□□ -0.44
Q6P435 AL136309.1-201ENST00000403917 691 ntBASIC12.3□□□□□ -0.44
Q6P435 COX5BP8-201ENST00000416911 349 ntBASIC12.3□□□□□ -0.44
Q6P435 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.3□□□□□ -0.44
Q6P435 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.3□□□□□ -0.44
Q6P435 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.3□□□□□ -0.44
Q6P435 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.3□□□□□ -0.44
Q6P435 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.3□□□□□ -0.44
Q6P435 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.3□□□□□ -0.44
Q6P435 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.3□□□□□ -0.44
Q6P435 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.3□□□□□ -0.44
Q6P435 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.3□□□□□ -0.44
Q6P435 AC027601.3-201ENST00000622907 509 ntBASIC12.3□□□□□ -0.44
Q6P435 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.3□□□□□ -0.44
Q6P435 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.3□□□□□ -0.44
Q6P435 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Q6P435 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.3□□□□□ -0.44
Q6P435 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 AC064801.2-201ENST00000625052 1303 ntBASIC12.3□□□□□ -0.44
Q6P435 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.3□□□□□ -0.44
Q6P435 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Q6P435 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Q6P435 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q6P435 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.29□□□□□ -0.44
Q6P435 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Q6P435 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.29□□□□□ -0.44
Q6P435 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.29□□□□□ -0.44
Q6P435 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.29□□□□□ -0.44
Q6P435 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.29□□□□□ -0.44
Q6P435 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Q6P435 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.29□□□□□ -0.44
Q6P435 NME2P1-201ENST00000426182 414 ntBASIC12.29□□□□□ -0.44
Q6P435 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.29□□□□□ -0.44
Q6P435 AL161932.2-201ENST00000435436 679 ntBASIC12.29□□□□□ -0.44
Q6P435 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.29□□□□□ -0.44
Q6P435 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.29□□□□□ -0.44
Q6P435 TMEM198B-204ENST00000484016 896 ntBASIC12.29□□□□□ -0.44
Q6P435 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.29□□□□□ -0.44
Q6P435 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.29□□□□□ -0.44
Q6P435 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.29□□□□□ -0.44
Q6P435 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.29□□□□□ -0.44
Q6P435 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.29□□□□□ -0.44
Q6P435 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.29□□□□□ -0.44
Q6P435 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.29□□□□□ -0.44
Q6P435 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.29□□□□□ -0.44
Q6P435 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.29□□□□□ -0.44
Q6P435 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.29□□□□□ -0.44
Q6P435 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Q6P435 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Q6P435 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.29□□□□□ -0.44
Q6P435 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Q6P435 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms