Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HMBOX1Q6NT76 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 HLA-K-203ENST00000430151 1046 ntBASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 RPL13P2-201ENST00000440687 659 ntBASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 AL512361.1-201ENST00000554200 418 ntBASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HMBOX1Q6NT76 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 C2-206ENST00000442278 2434 ntTSL 2 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14□□□□□ -0.17
HMBOX1Q6NT76 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 AC245100.3-201ENST00000441281 285 ntBASIC14□□□□□ -0.17
HMBOX1Q6NT76 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 SDHAP3-202ENST00000515467 728 ntBASIC14□□□□□ -0.17
HMBOX1Q6NT76 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 AC010336.2-201ENST00000564226 506 ntBASIC14□□□□□ -0.17
HMBOX1Q6NT76 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 AC025048.3-201ENST00000590609 569 ntBASIC14□□□□□ -0.17
HMBOX1Q6NT76 LINC01115-203ENST00000606068 577 ntBASIC14□□□□□ -0.17
HMBOX1Q6NT76 AC005702.4-201ENST00000618393 416 ntBASIC14□□□□□ -0.17
HMBOX1Q6NT76 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14□□□□□ -0.17
HMBOX1Q6NT76 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMBOX1Q6NT76 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms