Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AC005722.1-201ENST00000431878 964 ntBASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AC053503.3-201ENST00000448375 114 ntBASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AC023906.1-201ENST00000486386 453 ntBASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 KNOP1P1-201ENST00000542108 989 ntBASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AL359219.1-201ENST00000556311 934 ntBASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 AL591424.3-201ENST00000614278 872 ntBASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13DQ5THJ4 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 BAX-205ENST00000391871 687 ntTSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AC092115.1-201ENST00000566277 1402 ntBASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AP005264.5-201ENST00000590066 467 ntBASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AC005746.3-201ENST00000614751 393 ntBASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AC073347.1-201ENST00000421633 2643 ntBASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 FBXO36P1-201ENST00000579006 471 ntBASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AP001267.2-201ENST00000532619 2086 ntBASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 CDCA4P4-201ENST00000435216 680 ntBASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 TBC1D27-202ENST00000424239 1573 ntBASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
VPS13DQ5THJ4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms