Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DDR1Q08345 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.93■□□□□ 0.46
DDR1Q08345 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.93■□□□□ 0.46
DDR1Q08345 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.93■□□□□ 0.46
DDR1Q08345 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.93■□□□□ 0.46
DDR1Q08345 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.93■□□□□ 0.46
DDR1Q08345 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.93■□□□□ 0.46
DDR1Q08345 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 HLA-DPA2-205ENST00000433582 733 ntBASIC17.93■□□□□ 0.46
DDR1Q08345 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.93■□□□□ 0.46
DDR1Q08345 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.93■□□□□ 0.46
DDR1Q08345 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.93■□□□□ 0.46
DDR1Q08345 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.93■□□□□ 0.46
DDR1Q08345 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.93■□□□□ 0.46
DDR1Q08345 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.93■□□□□ 0.46
DDR1Q08345 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.93■□□□□ 0.46
DDR1Q08345 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 LAP3P2-201ENST00000454686 1454 ntBASIC17.93■□□□□ 0.46
DDR1Q08345 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.93■□□□□ 0.46
DDR1Q08345 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.93■□□□□ 0.46
DDR1Q08345 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
DDR1Q08345 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
DDR1Q08345 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.93■□□□□ 0.46
DDR1Q08345 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDR1Q08345 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
DDR1Q08345 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
DDR1Q08345 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 OR6D1P-203ENST00000641209 4860 ntBASIC17.92■□□□□ 0.46
DDR1Q08345 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDR1Q08345 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
DDR1Q08345 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.92■□□□□ 0.46
DDR1Q08345 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.92■□□□□ 0.46
DDR1Q08345 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC17.92■□□□□ 0.46
DDR1Q08345 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC083801.1-201ENST00000491689 358 ntBASIC17.92■□□□□ 0.46
DDR1Q08345 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDR1Q08345 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDR1Q08345 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
DDR1Q08345 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 AC004554.1-201ENST00000422830 1468 ntBASIC17.92■□□□□ 0.46
DDR1Q08345 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.92■□□□□ 0.46
DDR1Q08345 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.92■□□□□ 0.46
DDR1Q08345 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.92■□□□□ 0.46
DDR1Q08345 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.92■□□□□ 0.46
DDR1Q08345 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDR1Q08345 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DDR1Q08345 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.91■□□□□ 0.46
DDR1Q08345 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms