Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDH1Q08174 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDH1Q08174 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDH1Q08174 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDH1Q08174 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCDH1Q08174 AC007686.3-201ENST00000619017 3487 ntBASIC14.23□□□□□ -0.13
PCDH1Q08174 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PCDH1Q08174 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PCDH1Q08174 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.23□□□□□ -0.13
PCDH1Q08174 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PCDH1Q08174 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDH1Q08174 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDH1Q08174 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PCDH1Q08174 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PCDH1Q08174 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC139749.1-202ENST00000617529 3139 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PCDH1Q08174 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC063926.2-201ENST00000623766 1308 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDH1Q08174 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDH1Q08174 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDH1Q08174 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDH1Q08174 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC010141.1-201ENST00000411585 623 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDH1Q08174 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.22□□□□□ -0.13
PCDH1Q08174 CHMP1AP1-201ENST00000445563 662 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 AL035414.1-201ENST00000451327 857 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 KRT17P7-201ENST00000451704 1104 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
PCDH1Q08174 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
PCDH1Q08174 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC073413.1-201ENST00000603927 732 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 ZACNP1-201ENST00000612259 710 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 AC244669.2-201ENST00000612320 853 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC002472.3-201ENST00000640124 621 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
PCDH1Q08174 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDH1Q08174 AC009093.10-201ENST00000641956 1442 ntBASIC14.22□□□□□ -0.13
PCDH1Q08174 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCDH1Q08174 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDH1Q08174 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDH1Q08174 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PCDH1Q08174 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 TCAM1P-207ENST00000485295 1537 ntBASIC14.21□□□□□ -0.13
PCDH1Q08174 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
PCDH1Q08174 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDH1Q08174 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.21□□□□□ -0.13
PCDH1Q08174 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms