Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 PEG13-201ENST00000631594 5667 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CX3CL1P78423 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
CX3CL1P78423 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 BCRP2-202ENST00000447763 634 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 FO681548.1-201ENST00000455617 1132 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 USP32P1-208ENST00000506594 1164 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 BCRP6-201ENST00000510112 632 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 BCRP7-201ENST00000511549 544 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.94□□□□□ -0.5
CX3CL1P78423 AC008735.3-201ENST00000596646 500 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 AC233724.13-201ENST00000598383 410 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.94□□□□□ -0.5
CX3CL1P78423 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.94□□□□□ -0.5
CX3CL1P78423 AL022328.1-201ENST00000610050 478 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 AC012645.4-201ENST00000610691 1061 ntBASIC11.94□□□□□ -0.5
CX3CL1P78423 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CX3CL1P78423 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CX3CL1P78423 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CX3CL1P78423 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CX3CL1P78423 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.93□□□□□ -0.5
CX3CL1P78423 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.93□□□□□ -0.5
CX3CL1P78423 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.93□□□□□ -0.5
CX3CL1P78423 MTHFR-210ENST00000641407 2387 ntBASIC11.93□□□□□ -0.5
CX3CL1P78423 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
CX3CL1P78423 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.93□□□□□ -0.5
CX3CL1P78423 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CX3CL1P78423 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
CX3CL1P78423 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CX3CL1P78423 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.93□□□□□ -0.5
CX3CL1P78423 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.93□□□□□ -0.5
CX3CL1P78423 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CX3CL1P78423 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CX3CL1P78423 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CX3CL1P78423 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CX3CL1P78423 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.93□□□□□ -0.5
CX3CL1P78423 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
CX3CL1P78423 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CX3CL1P78423 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CX3CL1P78423 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms