Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS1BP61024 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS1BP61024 TFAMP1-201ENST00000412727 736 ntBASIC10.44□□□□□ -0.74
CKS1BP61024 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS1BP61024 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS1BP61024 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
CKS1BP61024 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS1BP61024 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS1BP61024 RNA5SP416-201ENST00000516838 111 ntBASIC10.44□□□□□ -0.74
CKS1BP61024 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS1BP61024 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS1BP61024 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS1BP61024 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS1BP61024 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS1BP61024 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS1BP61024 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS1BP61024 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.44□□□□□ -0.74
CKS1BP61024 AC007614.5-201ENST00000623424 8892 ntBASIC10.44□□□□□ -0.74
CKS1BP61024 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CKS1BP61024 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
CKS1BP61024 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS1BP61024 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
CKS1BP61024 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
CKS1BP61024 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.43□□□□□ -0.74
CKS1BP61024 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 PAM-203ENST00000346918 3302 ntTSL 5 BASIC10.43□□□□□ -0.74
CKS1BP61024 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
CKS1BP61024 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.43□□□□□ -0.74
CKS1BP61024 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
CKS1BP61024 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS1BP61024 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms