Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 BX088702.1-201ENST00000610784 235 ntBASIC14.14□□□□□ -0.15
VSX2P58304 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.14□□□□□ -0.15
VSX2P58304 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.14□□□□□ -0.15
VSX2P58304 AC007686.3-201ENST00000619017 3487 ntBASIC14.14□□□□□ -0.15
VSX2P58304 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
VSX2P58304 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.14□□□□□ -0.15
VSX2P58304 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.14□□□□□ -0.15
VSX2P58304 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.14□□□□□ -0.15
VSX2P58304 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.14□□□□□ -0.15
VSX2P58304 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VSX2P58304 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VSX2P58304 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
VSX2P58304 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VSX2P58304 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VSX2P58304 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VSX2P58304 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.13□□□□□ -0.15
VSX2P58304 PUDPP3-201ENST00000445368 636 ntBASIC14.13□□□□□ -0.15
VSX2P58304 ALG3P1-201ENST00000508806 1114 ntBASIC14.13□□□□□ -0.15
VSX2P58304 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.13□□□□□ -0.15
VSX2P58304 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
VSX2P58304 AC005730.2-201ENST00000564549 1184 ntBASIC14.13□□□□□ -0.15
VSX2P58304 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.13□□□□□ -0.15
VSX2P58304 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.13□□□□□ -0.15
VSX2P58304 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.13□□□□□ -0.15
VSX2P58304 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
VSX2P58304 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VSX2P58304 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VSX2P58304 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VSX2P58304 SBF1P1-201ENST00000444527 5631 ntBASIC14.13□□□□□ -0.15
VSX2P58304 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VSX2P58304 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.13□□□□□ -0.15
VSX2P58304 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VSX2P58304 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 MTHFR-210ENST00000641407 2387 ntBASIC14.12□□□□□ -0.15
VSX2P58304 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.12□□□□□ -0.15
VSX2P58304 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VSX2P58304 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.12□□□□□ -0.15
VSX2P58304 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 AC010141.1-201ENST00000411585 623 ntBASIC14.12□□□□□ -0.15
VSX2P58304 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.12□□□□□ -0.15
VSX2P58304 AC021723.1-201ENST00000486306 515 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms