Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN8P56748 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CLDN8P56748 GPALPP1-207ENST00000611650 899 ntBASIC14.02□□□□□ -0.17
CLDN8P56748 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.02□□□□□ -0.17
CLDN8P56748 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
CLDN8P56748 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN8P56748 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN8P56748 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN8P56748 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CLDN8P56748 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN8P56748 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CLDN8P56748 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CLDN8P56748 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN8P56748 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
CLDN8P56748 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN8P56748 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN8P56748 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CLDN8P56748 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN8P56748 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLDN8P56748 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN8P56748 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN8P56748 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CLDN8P56748 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 RN7SKP175-201ENST00000408472 289 ntBASIC14.01□□□□□ -0.17
CLDN8P56748 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.01□□□□□ -0.17
CLDN8P56748 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN8P56748 AC140912.1-201ENST00000577171 1054 ntBASIC14.01□□□□□ -0.17
CLDN8P56748 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN8P56748 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN8P56748 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN8P56748 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 AC130686.1-201ENST00000622936 2466 ntBASIC14.01□□□□□ -0.17
CLDN8P56748 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN8P56748 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLDN8P56748 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLDN8P56748 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CLDN8P56748 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CLDN8P56748 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CLDN8P56748 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN8P56748 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN8P56748 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLDN8P56748 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN8P56748 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLDN8P56748 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14□□□□□ -0.17
CLDN8P56748 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14□□□□□ -0.17
CLDN8P56748 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14□□□□□ -0.17
CLDN8P56748 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLDN8P56748 PIN1P1-201ENST00000412108 996 ntBASIC14□□□□□ -0.17
CLDN8P56748 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14□□□□□ -0.17
CLDN8P56748 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN8P56748 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLDN8P56748 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms