Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.9□□□□□ -0.18
SMSP52788 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.9□□□□□ -0.18
SMSP52788 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.9□□□□□ -0.18
SMSP52788 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMSP52788 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SMSP52788 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SMSP52788 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.9□□□□□ -0.18
SMSP52788 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.9□□□□□ -0.18
SMSP52788 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMSP52788 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.9□□□□□ -0.19
SMSP52788 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SMSP52788 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.9□□□□□ -0.19
SMSP52788 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SMSP52788 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.89□□□□□ -0.19
SMSP52788 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.89□□□□□ -0.19
SMSP52788 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SMSP52788 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.89□□□□□ -0.19
SMSP52788 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 LILRP1-201ENST00000444199 1370 ntBASIC13.89□□□□□ -0.19
SMSP52788 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.89□□□□□ -0.19
SMSP52788 GOLGA2P4-201ENST00000441462 777 ntBASIC13.89□□□□□ -0.19
SMSP52788 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 AP001258.2-201ENST00000529891 490 ntBASIC13.89□□□□□ -0.19
SMSP52788 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SMSP52788 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.89□□□□□ -0.19
SMSP52788 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.89□□□□□ -0.19
SMSP52788 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.89□□□□□ -0.19
SMSP52788 AC009542.2-202ENST00000619004 1067 ntBASIC13.89□□□□□ -0.19
SMSP52788 AC005252.2-201ENST00000624630 1141 ntBASIC13.89□□□□□ -0.19
SMSP52788 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 AL139099.5-201ENST00000635274 300 ntBASIC13.89□□□□□ -0.19
SMSP52788 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.89□□□□□ -0.19
SMSP52788 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.89□□□□□ -0.19
SMSP52788 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMSP52788 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SMSP52788 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.88□□□□□ -0.19
SMSP52788 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMSP52788 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMSP52788 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMSP52788 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMSP52788 AC152010.1-201ENST00000415779 2006 ntBASIC13.88□□□□□ -0.19
SMSP52788 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.88□□□□□ -0.19
SMSP52788 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMSP52788 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMSP52788 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMSP52788 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMSP52788 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SMSP52788 AC092135.3-201ENST00000624151 1846 ntBASIC13.88□□□□□ -0.19
SMSP52788 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMSP52788 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMSP52788 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.88□□□□□ -0.19
SMSP52788 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms