Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC009093.2-202ENST00000620513 2079 ntBASIC15.56■□□□□ 0.08
TUBP50607 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBP50607 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.56■□□□□ 0.08
TUBP50607 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBP50607 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TUBP50607 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBP50607 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TUBP50607 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBP50607 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBP50607 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBP50607 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TUBP50607 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TUBP50607 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TUBP50607 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBP50607 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 AC006504.5-208ENST00000588784 2401 ntBASIC15.55■□□□□ 0.08
TUBP50607 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBP50607 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 SHC1P1-201ENST00000425230 1745 ntBASIC15.55■□□□□ 0.08
TUBP50607 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBP50607 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBP50607 AC018735.1-201ENST00000437208 1502 ntBASIC15.55■□□□□ 0.08
TUBP50607 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 AL133338.1-201ENST00000565695 1517 ntBASIC15.55■□□□□ 0.08
TUBP50607 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.55■□□□□ 0.08
TUBP50607 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TUBP50607 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.55■□□□□ 0.08
TUBP50607 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.55■□□□□ 0.08
TUBP50607 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.55■□□□□ 0.08
TUBP50607 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TUBP50607 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.55■□□□□ 0.08
TUBP50607 MIR3615-201ENST00000581999 87 ntBASIC15.55■□□□□ 0.08
TUBP50607 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 AC007663.3-201ENST00000609632 465 ntBASIC15.55■□□□□ 0.08
TUBP50607 BX088702.1-201ENST00000610784 235 ntBASIC15.55■□□□□ 0.08
TUBP50607 AL023803.2-201ENST00000620080 638 ntBASIC15.55■□□□□ 0.08
TUBP50607 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 MIR600HG-201ENST00000449175 5984 ntBASIC15.55■□□□□ 0.08
TUBP50607 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBP50607 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBP50607 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TUBP50607 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBP50607 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBP50607 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TUBP50607 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 AC020910.5-201ENST00000623668 1865 ntBASIC15.54■□□□□ 0.08
TUBP50607 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBP50607 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBP50607 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBP50607 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TUBP50607 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBP50607 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBP50607 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.54■□□□□ 0.08
TUBP50607 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.54■□□□□ 0.08
TUBP50607 GCOM2-201ENST00000509133 1104 ntBASIC15.54■□□□□ 0.08
TUBP50607 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TUBP50607 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.54■□□□□ 0.08
TUBP50607 AC131206.1-201ENST00000538078 1211 ntBASIC15.54■□□□□ 0.08
TUBP50607 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBP50607 AC009955.4-201ENST00000597192 544 ntBASIC15.54■□□□□ 0.08
TUBP50607 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.54■□□□□ 0.08
TUBP50607 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBP50607 AC244452.3-201ENST00000636814 210 ntBASIC15.54■□□□□ 0.08
TUBP50607 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms