Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 GHSR-202ENST00000427970 912 ntBASIC13.97□□□□□ -0.17
CLK1P49759 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.97□□□□□ -0.17
CLK1P49759 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.97□□□□□ -0.17
CLK1P49759 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.97□□□□□ -0.17
CLK1P49759 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.97□□□□□ -0.17
CLK1P49759 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.97□□□□□ -0.17
CLK1P49759 MIR4745-201ENST00000577608 62 ntBASIC13.97□□□□□ -0.17
CLK1P49759 RN7SL204P-201ENST00000582831 262 ntBASIC13.97□□□□□ -0.17
CLK1P49759 AC093726.1-201ENST00000608064 963 ntBASIC13.97□□□□□ -0.17
CLK1P49759 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 CLK3P2-201ENST00000427566 1453 ntBASIC13.97□□□□□ -0.17
CLK1P49759 AL356585.2-201ENST00000625078 2396 ntBASIC13.97□□□□□ -0.17
CLK1P49759 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CLK1P49759 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.97□□□□□ -0.17
CLK1P49759 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLK1P49759 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLK1P49759 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLK1P49759 AC027612.1-201ENST00000445234 2395 ntBASIC13.96□□□□□ -0.17
CLK1P49759 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.96□□□□□ -0.17
CLK1P49759 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
CLK1P49759 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CLK1P49759 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.96□□□□□ -0.17
CLK1P49759 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.96□□□□□ -0.17
CLK1P49759 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 AC104457.1-201ENST00000401024 814 ntBASIC13.96□□□□□ -0.17
CLK1P49759 PIN1P1-201ENST00000412108 996 ntBASIC13.96□□□□□ -0.17
CLK1P49759 AC002472.2-201ENST00000442739 958 ntBASIC13.96□□□□□ -0.17
CLK1P49759 GNAQP1-201ENST00000444815 1067 ntBASIC13.96□□□□□ -0.17
CLK1P49759 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.96□□□□□ -0.17
CLK1P49759 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.96□□□□□ -0.17
CLK1P49759 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.96□□□□□ -0.17
CLK1P49759 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.96□□□□□ -0.17
CLK1P49759 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.96□□□□□ -0.17
CLK1P49759 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CLK1P49759 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.96□□□□□ -0.17
CLK1P49759 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.96□□□□□ -0.17
CLK1P49759 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.96□□□□□ -0.17
CLK1P49759 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.96□□□□□ -0.17
CLK1P49759 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.96□□□□□ -0.17
CLK1P49759 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLK1P49759 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLK1P49759 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLK1P49759 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CLK1P49759 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLK1P49759 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CLK1P49759 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.96□□□□□ -0.18
CLK1P49759 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.96□□□□□ -0.18
CLK1P49759 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 238.1 ms