Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 AC006504.5-208ENST00000588784 2401 ntBASIC14.34□□□□□ -0.11
CSNK1EP49674 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSNK1EP49674 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSNK1EP49674 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1EP49674 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1EP49674 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 PIN4P1-201ENST00000451079 396 ntBASIC14.34□□□□□ -0.11
CSNK1EP49674 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1EP49674 FTH1P22-201ENST00000456305 520 ntBASIC14.34□□□□□ -0.11
CSNK1EP49674 AC018463.1-201ENST00000456674 917 ntBASIC14.34□□□□□ -0.11
CSNK1EP49674 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.34□□□□□ -0.11
CSNK1EP49674 RPL18AP3-201ENST00000462885 528 ntBASIC14.34□□□□□ -0.11
CSNK1EP49674 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK1EP49674 AP003398.1-201ENST00000531124 318 ntBASIC14.34□□□□□ -0.11
CSNK1EP49674 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1EP49674 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1EP49674 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1EP49674 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1EP49674 AC107464.3-201ENST00000609172 737 ntBASIC14.34□□□□□ -0.11
CSNK1EP49674 AL161773.1-201ENST00000624845 863 ntBASIC14.34□□□□□ -0.11
CSNK1EP49674 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CSNK1EP49674 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1EP49674 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.34□□□□□ -0.11
CSNK1EP49674 AL590440.2-201ENST00000641973 1595 ntBASIC14.34□□□□□ -0.11
CSNK1EP49674 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1EP49674 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CSNK1EP49674 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CSNK1EP49674 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1EP49674 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1EP49674 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
CSNK1EP49674 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CSNK1EP49674 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.33□□□□□ -0.11
CSNK1EP49674 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CSNK1EP49674 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1EP49674 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.33□□□□□ -0.12
CSNK1EP49674 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1EP49674 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1EP49674 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 AL627389.1-201ENST00000413508 1182 ntBASIC14.33□□□□□ -0.12
CSNK1EP49674 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CSNK1EP49674 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1EP49674 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1EP49674 IGHV3-37-201ENST00000518544 340 ntBASIC14.33□□□□□ -0.12
CSNK1EP49674 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.33□□□□□ -0.12
CSNK1EP49674 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1EP49674 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK1EP49674 AL022334.2-201ENST00000610000 484 ntBASIC14.33□□□□□ -0.12
CSNK1EP49674 MIR6858-201ENST00000620733 67 ntBASIC14.33□□□□□ -0.12
CSNK1EP49674 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1EP49674 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1EP49674 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1EP49674 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1EP49674 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1EP49674 AC139712.1-201ENST00000378256 1875 ntBASIC14.33□□□□□ -0.12
CSNK1EP49674 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1EP49674 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 AC099063.4-201ENST00000641099 1602 ntBASIC14.33□□□□□ -0.12
CSNK1EP49674 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1EP49674 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1EP49674 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1EP49674 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms