Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
KRT6CP48668 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6CP48668 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 AC092053.3-201ENST00000641308 4975 ntBASIC14.35□□□□□ -0.11
KRT6CP48668 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.35□□□□□ -0.11
KRT6CP48668 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
KRT6CP48668 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.35□□□□□ -0.11
KRT6CP48668 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
KRT6CP48668 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.35□□□□□ -0.11
KRT6CP48668 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 AC245100.3-201ENST00000441281 285 ntBASIC14.35□□□□□ -0.11
KRT6CP48668 BCRP1-201ENST00000444246 691 ntBASIC14.35□□□□□ -0.11
KRT6CP48668 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.35□□□□□ -0.11
KRT6CP48668 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.35□□□□□ -0.11
KRT6CP48668 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.35□□□□□ -0.11
KRT6CP48668 AC138761.1-201ENST00000584393 385 ntBASIC14.35□□□□□ -0.11
KRT6CP48668 AC004466.1-201ENST00000599515 1080 ntBASIC14.35□□□□□ -0.11
KRT6CP48668 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.35□□□□□ -0.11
KRT6CP48668 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.35□□□□□ -0.11
KRT6CP48668 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
KRT6CP48668 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.35□□□□□ -0.11
KRT6CP48668 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6CP48668 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
KRT6CP48668 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
KRT6CP48668 AC090505.1-201ENST00000430515 1834 ntBASIC14.34□□□□□ -0.11
KRT6CP48668 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6CP48668 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KRT6CP48668 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
KRT6CP48668 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6CP48668 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
KRT6CP48668 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.34□□□□□ -0.11
KRT6CP48668 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6CP48668 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.34□□□□□ -0.11
KRT6CP48668 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6CP48668 AC002472.2-201ENST00000442739 958 ntBASIC14.34□□□□□ -0.11
KRT6CP48668 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.34□□□□□ -0.11
KRT6CP48668 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.34□□□□□ -0.11
KRT6CP48668 MIR6074-201ENST00000612054 107 ntBASIC14.34□□□□□ -0.11
KRT6CP48668 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KRT6CP48668 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
KRT6CP48668 AL928921.2-201ENST00000641325 2442 ntBASIC14.34□□□□□ -0.11
KRT6CP48668 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.34□□□□□ -0.11
KRT6CP48668 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
KRT6CP48668 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRT6CP48668 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms