Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
KDM5CP41229 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 PGAM1P11-201ENST00000416729 680 ntBASIC21.37■■□□□ 1.01
KDM5CP41229 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.37■■□□□ 1.01
KDM5CP41229 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC21.37■■□□□ 1.01
KDM5CP41229 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC21.37■■□□□ 1.01
KDM5CP41229 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC21.37■■□□□ 1.01
KDM5CP41229 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC21.37■■□□□ 1.01
KDM5CP41229 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC21.37■■□□□ 1.01
KDM5CP41229 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC21.37■■□□□ 1.01
KDM5CP41229 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 SORD2P-201ENST00000558556 1069 ntBASIC21.37■■□□□ 1.01
KDM5CP41229 AL009176.1-201ENST00000607876 650 ntBASIC21.37■■□□□ 1.01
KDM5CP41229 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC21.37■■□□□ 1.01
KDM5CP41229 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC21.37■■□□□ 1.01
KDM5CP41229 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC21.37■■□□□ 1.01
KDM5CP41229 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.37■■□□□ 1.01
KDM5CP41229 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KDM5CP41229 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
KDM5CP41229 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KDM5CP41229 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KDM5CP41229 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC21.36■■□□□ 1.01
KDM5CP41229 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 AC113347.2-201ENST00000512350 279 ntBASIC21.36■■□□□ 1.01
KDM5CP41229 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 CES1P2-201ENST00000566467 1242 ntBASIC21.36■■□□□ 1.01
KDM5CP41229 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC21.36■■□□□ 1.01
KDM5CP41229 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
KDM5CP41229 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.36■■□□□ 1.01
KDM5CP41229 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC21.36■■□□□ 1.01
KDM5CP41229 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KDM5CP41229 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
KDM5CP41229 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 OR7E115P-201ENST00000382617 1024 ntBASIC21.36■■□□□ 1.01
KDM5CP41229 SNORA57-201ENST00000383870 149 ntBASIC21.36■■□□□ 1.01
KDM5CP41229 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KDM5CP41229 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC21.36■■□□□ 1.01
KDM5CP41229 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC21.36■■□□□ 1.01
KDM5CP41229 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC21.36■■□□□ 1.01
KDM5CP41229 RN7SL375P-201ENST00000492442 298 ntBASIC21.36■■□□□ 1.01
KDM5CP41229 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC21.36■■□□□ 1.01
KDM5CP41229 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC21.36■■□□□ 1.01
KDM5CP41229 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC21.36■■□□□ 1.01
KDM5CP41229 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
KDM5CP41229 AC005274.1-201ENST00000623460 802 ntBASIC21.36■■□□□ 1.01
KDM5CP41229 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC21.36■■□□□ 1.01
KDM5CP41229 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM5CP41229 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC21.35■■□□□ 1.01
KDM5CP41229 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM5CP41229 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC21.35■■□□□ 1.01
KDM5CP41229 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC21.35■■□□□ 1.01
KDM5CP41229 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KDM5CP41229 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
KDM5CP41229 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC21.35■■□□□ 1.01
KDM5CP41229 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC21.35■■□□□ 1.01
KDM5CP41229 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC21.35■■□□□ 1.01
KDM5CP41229 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM5CP41229 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC21.35■■□□□ 1.01
KDM5CP41229 ZNF877P-201ENST00000437614 612 ntBASIC21.35■■□□□ 1.01
KDM5CP41229 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC21.35■■□□□ 1.01
KDM5CP41229 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
KDM5CP41229 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC21.35■■□□□ 1.01
KDM5CP41229 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KDM5CP41229 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
KDM5CP41229 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KDM5CP41229 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KDM5CP41229 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC21.34■■□□□ 1.01
KDM5CP41229 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms