Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 BX284668.4-201ENST00000453917 508 ntBASIC13.55□□□□□ -0.24
RFC3P40938 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.55□□□□□ -0.24
RFC3P40938 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.55□□□□□ -0.24
RFC3P40938 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.55□□□□□ -0.24
RFC3P40938 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.55□□□□□ -0.24
RFC3P40938 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.55□□□□□ -0.24
RFC3P40938 MIR4783-201ENST00000580343 82 ntBASIC13.55□□□□□ -0.24
RFC3P40938 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 AC138649.2-201ENST00000615886 705 ntBASIC13.55□□□□□ -0.24
RFC3P40938 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.55□□□□□ -0.24
RFC3P40938 AL138725.1-201ENST00000407347 1314 ntBASIC13.55□□□□□ -0.24
RFC3P40938 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 AL109954.1-202ENST00000564051 2148 ntBASIC13.55□□□□□ -0.24
RFC3P40938 KRT8P29-201ENST00000420409 1371 ntBASIC13.55□□□□□ -0.24
RFC3P40938 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RFC3P40938 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 AC013726.1-201ENST00000563747 2285 ntBASIC13.55□□□□□ -0.24
RFC3P40938 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFC3P40938 AC003102.2-201ENST00000589195 1469 ntBASIC13.55□□□□□ -0.24
RFC3P40938 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RFC3P40938 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.54□□□□□ -0.24
RFC3P40938 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 SHC1P1-201ENST00000425230 1745 ntBASIC13.54□□□□□ -0.24
RFC3P40938 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RFC3P40938 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.54□□□□□ -0.24
RFC3P40938 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.54□□□□□ -0.24
RFC3P40938 AC005740.2-201ENST00000511085 419 ntBASIC13.54□□□□□ -0.24
RFC3P40938 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.54□□□□□ -0.24
RFC3P40938 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.54□□□□□ -0.24
RFC3P40938 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.54□□□□□ -0.24
RFC3P40938 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 NDUFV2P1-201ENST00000596415 907 ntBASIC13.54□□□□□ -0.24
RFC3P40938 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RFC3P40938 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RFC3P40938 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.54□□□□□ -0.24
RFC3P40938 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.54□□□□□ -0.24
RFC3P40938 CICP20-201ENST00000443330 2801 ntBASIC13.54□□□□□ -0.24
RFC3P40938 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RFC3P40938 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.54□□□□□ -0.24
RFC3P40938 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.54□□□□□ -0.24
RFC3P40938 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFC3P40938 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.54□□□□□ -0.24
RFC3P40938 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RFC3P40938 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFC3P40938 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.53□□□□□ -0.24
RFC3P40938 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms