Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.42■□□□□ 0.7
USP6P35125 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6P35125 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6P35125 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC19.42■□□□□ 0.7
USP6P35125 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 RN7SL767P-201ENST00000493013 295 ntBASIC19.42■□□□□ 0.7
USP6P35125 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC19.42■□□□□ 0.7
USP6P35125 OR2A1-AS1-210ENST00000496968 531 ntBASIC19.42■□□□□ 0.7
USP6P35125 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6P35125 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6P35125 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC19.42■□□□□ 0.7
USP6P35125 RN7SL455P-201ENST00000580629 282 ntBASIC19.42■□□□□ 0.7
USP6P35125 AC138466.4-201ENST00000623965 852 ntBASIC19.42■□□□□ 0.7
USP6P35125 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.42■□□□□ 0.7
USP6P35125 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.42■□□□□ 0.7
USP6P35125 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP6P35125 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6P35125 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6P35125 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6P35125 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
USP6P35125 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.41■□□□□ 0.7
USP6P35125 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
USP6P35125 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.41■□□□□ 0.7
USP6P35125 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.41■□□□□ 0.7
USP6P35125 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.41■□□□□ 0.7
USP6P35125 AC232323.1-201ENST00000540724 2099 ntBASIC19.41■□□□□ 0.7
USP6P35125 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC19.41■□□□□ 0.7
USP6P35125 GNG10P1-201ENST00000452289 199 ntBASIC19.41■□□□□ 0.7
USP6P35125 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC19.41■□□□□ 0.7
USP6P35125 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.41■□□□□ 0.7
USP6P35125 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC19.41■□□□□ 0.7
USP6P35125 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6P35125 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6P35125 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 ODCP-201ENST00000459650 1639 ntBASIC19.4■□□□□ 0.7
USP6P35125 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
USP6P35125 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6P35125 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.4■□□□□ 0.7
USP6P35125 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
USP6P35125 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6P35125 ACTG1P19-201ENST00000418987 1116 ntBASIC19.4■□□□□ 0.7
USP6P35125 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC19.4■□□□□ 0.7
USP6P35125 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC19.4■□□□□ 0.7
USP6P35125 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
USP6P35125 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC19.4■□□□□ 0.7
USP6P35125 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC19.4■□□□□ 0.7
USP6P35125 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC19.4■□□□□ 0.7
USP6P35125 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP6P35125 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6P35125 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6P35125 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 AC011498.7-201ENST00000624986 2027 ntBASIC19.4■□□□□ 0.7
USP6P35125 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP6P35125 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6P35125 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
USP6P35125 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms