Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KCNA3P22001 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
KCNA3P22001 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA3P22001 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA3P22001 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
KCNA3P22001 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KCNA3P22001 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA3P22001 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA3P22001 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.66■□□□□ 0.42
KCNA3P22001 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
KCNA3P22001 RN7SL128P-201ENST00000467883 305 ntBASIC17.66■□□□□ 0.42
KCNA3P22001 RPS18P9-201ENST00000482817 460 ntBASIC17.66■□□□□ 0.42
KCNA3P22001 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.66■□□□□ 0.42
KCNA3P22001 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.66■□□□□ 0.42
KCNA3P22001 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA3P22001 AC145285.5-201ENST00000562217 361 ntBASIC17.66■□□□□ 0.42
KCNA3P22001 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.66■□□□□ 0.42
KCNA3P22001 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KCNA3P22001 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA3P22001 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
KCNA3P22001 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
KCNA3P22001 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.66■□□□□ 0.42
KCNA3P22001 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KCNA3P22001 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
KCNA3P22001 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.65■□□□□ 0.42
KCNA3P22001 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA3P22001 ODCP-201ENST00000459650 1639 ntBASIC17.65■□□□□ 0.42
KCNA3P22001 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
KCNA3P22001 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.65■□□□□ 0.42
KCNA3P22001 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KCNA3P22001 OR7E115P-201ENST00000382617 1024 ntBASIC17.65■□□□□ 0.42
KCNA3P22001 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.65■□□□□ 0.42
KCNA3P22001 LINC00265-2P-201ENST00000413372 782 ntBASIC17.65■□□□□ 0.42
KCNA3P22001 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA3P22001 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC17.65■□□□□ 0.42
KCNA3P22001 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA3P22001 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA3P22001 BCL2L12P1-201ENST00000508390 733 ntBASIC17.65■□□□□ 0.42
KCNA3P22001 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.65■□□□□ 0.42
KCNA3P22001 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA3P22001 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.65■□□□□ 0.42
KCNA3P22001 AP005264.5-201ENST00000590066 467 ntBASIC17.65■□□□□ 0.42
KCNA3P22001 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 C18orf15-201ENST00000623680 2534 ntBASIC17.65■□□□□ 0.42
KCNA3P22001 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA3P22001 AC020658.6-201ENST00000623564 1870 ntBASIC17.65■□□□□ 0.42
KCNA3P22001 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
KCNA3P22001 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA3P22001 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
KCNA3P22001 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
KCNA3P22001 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
KCNA3P22001 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.64■□□□□ 0.42
KCNA3P22001 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
KCNA3P22001 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KCNA3P22001 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.64■□□□□ 0.41
KCNA3P22001 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms