Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN1P18031 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN1P18031 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN1P18031 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN1P18031 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN1P18031 AC026748.1-201ENST00000624349 3251 ntBASIC15.56■□□□□ 0.08
PTPN1P18031 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN1P18031 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.56■□□□□ 0.08
PTPN1P18031 INTS4P1-203ENST00000641008 3683 ntBASIC15.56■□□□□ 0.08
PTPN1P18031 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN1P18031 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN1P18031 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN1P18031 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN1P18031 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN1P18031 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN1P18031 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN1P18031 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 FAM90A7P-201ENST00000382628 1395 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 FAM90A23P-201ENST00000400136 1395 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PTPN1P18031 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN1P18031 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN1P18031 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PTPN1P18031 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PTPN1P18031 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN1P18031 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PTPN1P18031 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 AC016700.1-201ENST00000429424 312 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.55■□□□□ 0.08
PTPN1P18031 BX284668.4-201ENST00000453917 508 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN1P18031 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN1P18031 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN1P18031 SCARNA20.5-201ENST00000516991 142 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN1P18031 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN1P18031 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN1P18031 SNORD3B-2-202ENST00000571722 791 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 AC138649.2-201ENST00000615886 705 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 AL136295.7-201ENST00000619226 1200 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN1P18031 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN1P18031 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN1P18031 AL390755.1-201ENST00000623716 2027 ntBASIC15.55■□□□□ 0.08
PTPN1P18031 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN1P18031 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN1P18031 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN1P18031 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PTPN1P18031 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN1P18031 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN1P18031 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PTPN1P18031 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN1P18031 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN1P18031 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PTPN1P18031 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PTPN1P18031 AC022447.6-201ENST00000515522 438 ntBASIC15.54■□□□□ 0.08
PTPN1P18031 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN1P18031 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN1P18031 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PTPN1P18031 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PTPN1P18031 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN1P18031 AC007686.3-201ENST00000619017 3487 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms