Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 TREML5P-201ENST00000421694 576 ntBASIC12.54□□□□□ -0.4
HIST1H1DP16402 TSSK5P-201ENST00000423978 907 ntBASIC12.54□□□□□ -0.4
HIST1H1DP16402 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 AC241585.1-201ENST00000433527 519 ntBASIC12.54□□□□□ -0.4
HIST1H1DP16402 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 AC114812.1-204ENST00000449669 728 ntBASIC12.54□□□□□ -0.4
HIST1H1DP16402 GIMAP3P-201ENST00000495150 836 ntBASIC12.54□□□□□ -0.4
HIST1H1DP16402 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 AC009407.1-201ENST00000568958 598 ntBASIC12.54□□□□□ -0.4
HIST1H1DP16402 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 SPDYE22P-201ENST00000582158 798 ntBASIC12.54□□□□□ -0.4
HIST1H1DP16402 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 AC134684.3-201ENST00000641758 218 ntBASIC12.54□□□□□ -0.4
HIST1H1DP16402 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H1DP16402 INTS4P2-202ENST00000614726 2019 ntBASIC12.54□□□□□ -0.4
HIST1H1DP16402 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H1DP16402 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 DGCR9-201ENST00000609630 2415 ntBASIC12.53□□□□□ -0.4
HIST1H1DP16402 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 AC004449.1-201ENST00000564240 433 ntBASIC12.53□□□□□ -0.4
HIST1H1DP16402 AC120045.2-201ENST00000567334 178 ntBASIC12.53□□□□□ -0.4
HIST1H1DP16402 AC138761.1-201ENST00000584393 385 ntBASIC12.53□□□□□ -0.4
HIST1H1DP16402 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 BRI3BPP1-201ENST00000594224 787 ntBASIC12.53□□□□□ -0.4
HIST1H1DP16402 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H1DP16402 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 CICP20-201ENST00000443330 2801 ntBASIC12.53□□□□□ -0.4
HIST1H1DP16402 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 AC099521.3-201ENST00000624251 2938 ntBASIC12.53□□□□□ -0.4
HIST1H1DP16402 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H1DP16402 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms