Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AC073413.1-201ENST00000603927 732 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 BX088702.1-201ENST00000610784 235 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AP001002.3-201ENST00000623482 206 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 AC215219.1-201ENST00000400706 1817 ntBASIC13.23□□□□□ -0.29
HLA-DOBP13765 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DOBP13765 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DOBP13765 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 AC006001.1-201ENST00000325130 474 ntBASIC13.22□□□□□ -0.29
HLA-DOBP13765 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 CD8B2-202ENST00000417670 633 ntBASIC13.22□□□□□ -0.29
HLA-DOBP13765 ARSEP1-201ENST00000420443 635 ntBASIC13.22□□□□□ -0.29
HLA-DOBP13765 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 AC103988.2-201ENST00000561804 725 ntBASIC13.22□□□□□ -0.29
HLA-DOBP13765 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 AC139712.1-201ENST00000378256 1875 ntBASIC13.22□□□□□ -0.29
HLA-DOBP13765 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
HLA-DOBP13765 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DOBP13765 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DOBP13765 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.21□□□□□ -0.29
HLA-DOBP13765 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms