Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD28P10747 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.55□□□□□ -0.56
CD28P10747 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.55□□□□□ -0.56
CD28P10747 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.55□□□□□ -0.56
CD28P10747 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD28P10747 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD28P10747 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.55□□□□□ -0.56
CD28P10747 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD28P10747 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD28P10747 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD28P10747 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CD28P10747 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD28P10747 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.55□□□□□ -0.56
CD28P10747 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.54□□□□□ -0.56
CD28P10747 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 AC023090.2-201ENST00000625182 2110 ntBASIC11.54□□□□□ -0.56
CD28P10747 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CD28P10747 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 AC013268.4-201ENST00000637413 2228 ntBASIC11.54□□□□□ -0.56
CD28P10747 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 AC091046.1-201ENST00000331871 207 ntBASIC11.54□□□□□ -0.56
CD28P10747 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.54□□□□□ -0.56
CD28P10747 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 GGCT-203ENST00000409144 836 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 FAM58BP-201ENST00000439056 645 ntBASIC11.54□□□□□ -0.56
CD28P10747 PUDPP3-201ENST00000445368 636 ntBASIC11.54□□□□□ -0.56
CD28P10747 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 SUPT4H1P2-201ENST00000501248 353 ntBASIC11.54□□□□□ -0.56
CD28P10747 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC11.54□□□□□ -0.56
CD28P10747 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 AC134698.3-201ENST00000523880 214 ntBASIC11.54□□□□□ -0.56
CD28P10747 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 AL160314.3-201ENST00000556041 767 ntBASIC11.54□□□□□ -0.56
CD28P10747 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 RN7SL574P-201ENST00000581512 297 ntBASIC11.54□□□□□ -0.56
CD28P10747 AC005962.1-201ENST00000584100 773 ntBASIC11.54□□□□□ -0.56
CD28P10747 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC11.54□□□□□ -0.56
CD28P10747 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC11.54□□□□□ -0.56
CD28P10747 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.54□□□□□ -0.56
CD28P10747 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.54□□□□□ -0.56
CD28P10747 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.54□□□□□ -0.56
CD28P10747 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CD28P10747 SSR4P1-203ENST00000599569 2260 ntBASIC11.54□□□□□ -0.56
CD28P10747 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.54□□□□□ -0.56
CD28P10747 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 AC126365.1-201ENST00000578585 1514 ntBASIC11.54□□□□□ -0.56
CD28P10747 AL008718.2-201ENST00000609206 1313 ntBASIC11.54□□□□□ -0.56
CD28P10747 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CD28P10747 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD28P10747 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
CD28P10747 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.53□□□□□ -0.56
CD28P10747 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
CD28P10747 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.53□□□□□ -0.56
CD28P10747 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.53□□□□□ -0.56
CD28P10747 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
CD28P10747 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CD28P10747 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD28P10747 MBLAC2-202ENST00000514906 1936 ntBASIC11.53□□□□□ -0.56
CD28P10747 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms