Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CYP3A4P08684 AC005912.2-201ENST00000619492 2400 ntBASIC16.4■□□□□ 0.22
CYP3A4P08684 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.4■□□□□ 0.22
CYP3A4P08684 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.4■□□□□ 0.22
CYP3A4P08684 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYP3A4P08684 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.4■□□□□ 0.22
CYP3A4P08684 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.4■□□□□ 0.22
CYP3A4P08684 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.4■□□□□ 0.22
CYP3A4P08684 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.4■□□□□ 0.22
CYP3A4P08684 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYP3A4P08684 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CYP3A4P08684 BCYRN1-201ENST00000418539 200 ntBASIC16.4■□□□□ 0.22
CYP3A4P08684 ISCA2P1-201ENST00000425548 448 ntBASIC16.4■□□□□ 0.22
CYP3A4P08684 AC092580.1-201ENST00000433998 658 ntBASIC16.4■□□□□ 0.22
CYP3A4P08684 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.4■□□□□ 0.22
CYP3A4P08684 AC024681.1-201ENST00000521917 487 ntBASIC16.4■□□□□ 0.22
CYP3A4P08684 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.4■□□□□ 0.22
CYP3A4P08684 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.4■□□□□ 0.22
CYP3A4P08684 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.4■□□□□ 0.22
CYP3A4P08684 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.4■□□□□ 0.22
CYP3A4P08684 AC138627.1-207ENST00000641560 1006 ntBASIC16.4■□□□□ 0.22
CYP3A4P08684 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYP3A4P08684 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.4■□□□□ 0.22
CYP3A4P08684 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CYP3A4P08684 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CYP3A4P08684 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.4■□□□□ 0.22
CYP3A4P08684 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYP3A4P08684 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CYP3A4P08684 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYP3A4P08684 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYP3A4P08684 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.4■□□□□ 0.22
CYP3A4P08684 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYP3A4P08684 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CYP3A4P08684 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.4■□□□□ 0.22
CYP3A4P08684 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.4■□□□□ 0.22
CYP3A4P08684 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.4■□□□□ 0.22
CYP3A4P08684 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CYP3A4P08684 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CYP3A4P08684 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CYP3A4P08684 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CYP3A4P08684 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.39■□□□□ 0.21
CYP3A4P08684 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CYP3A4P08684 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.39■□□□□ 0.21
CYP3A4P08684 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 LINC01165-201ENST00000445190 1623 ntBASIC16.39■□□□□ 0.21
CYP3A4P08684 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CYP3A4P08684 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CYP3A4P08684 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.39■□□□□ 0.21
CYP3A4P08684 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.39■□□□□ 0.21
CYP3A4P08684 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 AP001505.2-201ENST00000616815 443 ntBASIC16.39■□□□□ 0.21
CYP3A4P08684 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 INTS4P1-203ENST00000641008 3683 ntBASIC16.39■□□□□ 0.21
CYP3A4P08684 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.39■□□□□ 0.21
CYP3A4P08684 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYP3A4P08684 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CYP3A4P08684 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 FAM45BP-202ENST00000592932 1624 ntBASIC16.38■□□□□ 0.21
CYP3A4P08684 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.38■□□□□ 0.21
CYP3A4P08684 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CYP3A4P08684 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms