Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHGBP05060 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHGBP05060 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.59■□□□□ 0.41
CHGBP05060 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHGBP05060 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHGBP05060 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHGBP05060 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHGBP05060 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHGBP05060 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.58■□□□□ 0.4
CHGBP05060 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.58■□□□□ 0.4
CHGBP05060 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.58■□□□□ 0.4
CHGBP05060 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.58■□□□□ 0.4
CHGBP05060 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.58■□□□□ 0.4
CHGBP05060 TUBB8P8-201ENST00000458717 1058 ntBASIC17.58■□□□□ 0.4
CHGBP05060 KRT8P13-201ENST00000463294 1010 ntBASIC17.58■□□□□ 0.4
CHGBP05060 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.58■□□□□ 0.4
CHGBP05060 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.58■□□□□ 0.4
CHGBP05060 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.58■□□□□ 0.4
CHGBP05060 AL023803.2-201ENST00000620080 638 ntBASIC17.58■□□□□ 0.4
CHGBP05060 AC092299.1-201ENST00000632679 757 ntBASIC17.58■□□□□ 0.4
CHGBP05060 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
CHGBP05060 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CHGBP05060 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.58■□□□□ 0.4
CHGBP05060 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHGBP05060 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CHGBP05060 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.57■□□□□ 0.4
CHGBP05060 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHGBP05060 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHGBP05060 AC009093.10-201ENST00000641956 1442 ntBASIC17.57■□□□□ 0.4
CHGBP05060 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHGBP05060 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHGBP05060 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.57■□□□□ 0.4
CHGBP05060 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.57■□□□□ 0.4
CHGBP05060 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHGBP05060 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.57■□□□□ 0.4
CHGBP05060 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.57■□□□□ 0.4
CHGBP05060 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHGBP05060 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.57■□□□□ 0.4
CHGBP05060 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.57■□□□□ 0.4
CHGBP05060 AC012441.2-201ENST00000444843 739 ntBASIC17.57■□□□□ 0.4
CHGBP05060 AL035414.1-201ENST00000451327 857 ntBASIC17.57■□□□□ 0.4
CHGBP05060 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.57■□□□□ 0.4
CHGBP05060 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHGBP05060 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.57■□□□□ 0.4
CHGBP05060 SORD2P-201ENST00000558556 1069 ntBASIC17.57■□□□□ 0.4
CHGBP05060 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.57■□□□□ 0.4
CHGBP05060 AC013355.1-201ENST00000562625 723 ntBASIC17.57■□□□□ 0.4
CHGBP05060 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.57■□□□□ 0.4
CHGBP05060 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHGBP05060 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.57■□□□□ 0.4
CHGBP05060 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CHGBP05060 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHGBP05060 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.56■□□□□ 0.4
CHGBP05060 MST1P2-201ENST00000457982 2291 ntBASIC17.56■□□□□ 0.4
CHGBP05060 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.56■□□□□ 0.4
CHGBP05060 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.56■□□□□ 0.4
CHGBP05060 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.56■□□□□ 0.4
CHGBP05060 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.56■□□□□ 0.4
CHGBP05060 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.56■□□□□ 0.4
CHGBP05060 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 OR2R1P-201ENST00000441404 914 ntBASIC17.56■□□□□ 0.4
CHGBP05060 SPTLC1P5-201ENST00000450718 252 ntBASIC17.56■□□□□ 0.4
CHGBP05060 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.56■□□□□ 0.4
CHGBP05060 AKR7A2P1-201ENST00000460134 915 ntBASIC17.56■□□□□ 0.4
CHGBP05060 AC091804.1-201ENST00000486888 567 ntBASIC17.56■□□□□ 0.4
CHGBP05060 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.56■□□□□ 0.4
CHGBP05060 AC005740.2-201ENST00000511085 419 ntBASIC17.56■□□□□ 0.4
CHGBP05060 AC009779.1-201ENST00000551138 283 ntBASIC17.56■□□□□ 0.4
CHGBP05060 RBM8B-201ENST00000555532 525 ntBASIC17.56■□□□□ 0.4
CHGBP05060 RN7SL163P-201ENST00000583100 276 ntBASIC17.56■□□□□ 0.4
CHGBP05060 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.56■□□□□ 0.4
CHGBP05060 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.56■□□□□ 0.4
CHGBP05060 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
CHGBP05060 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CHGBP05060 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHGBP05060 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.56■□□□□ 0.4
CHGBP05060 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.56■□□□□ 0.4
CHGBP05060 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CHGBP05060 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms