Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
APOC1P02654 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC1P02654 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC1P02654 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 SPTLC1P1-201ENST00000447199 261 ntBASIC13.14□□□□□ -0.31
APOC1P02654 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC1P02654 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.14□□□□□ -0.31
APOC1P02654 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC1P02654 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.14□□□□□ -0.31
APOC1P02654 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
APOC1P02654 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
APOC1P02654 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOC1P02654 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC1P02654 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
APOC1P02654 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
APOC1P02654 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.13□□□□□ -0.31
APOC1P02654 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC1P02654 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
APOC1P02654 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
APOC1P02654 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
APOC1P02654 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
APOC1P02654 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 MIR770-201ENST00000390219 98 ntBASIC13.13□□□□□ -0.31
APOC1P02654 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.13□□□□□ -0.31
APOC1P02654 KLF2P2-201ENST00000416807 1039 ntBASIC13.13□□□□□ -0.31
APOC1P02654 AC007969.1-201ENST00000433675 447 ntBASIC13.13□□□□□ -0.31
APOC1P02654 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.13□□□□□ -0.31
APOC1P02654 AL162726.2-201ENST00000438986 1017 ntBASIC13.13□□□□□ -0.31
APOC1P02654 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC1P02654 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
APOC1P02654 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC1P02654 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.13□□□□□ -0.31
APOC1P02654 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.13□□□□□ -0.31
APOC1P02654 SPDYE22P-201ENST00000582158 798 ntBASIC13.13□□□□□ -0.31
APOC1P02654 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.13□□□□□ -0.31
APOC1P02654 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.13□□□□□ -0.31
APOC1P02654 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOC1P02654 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
APOC1P02654 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms