Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SHC1P1-201ENST00000425230 1745 ntBASIC11.4□□□□□ -0.58
TRBV12-3P01733 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 MIR326-201ENST00000362220 95 ntBASIC11.4□□□□□ -0.58
TRBV12-3P01733 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 ALG3P1-201ENST00000508806 1114 ntBASIC11.4□□□□□ -0.58
TRBV12-3P01733 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.4□□□□□ -0.58
TRBV12-3P01733 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRBV12-3P01733 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
TRBV12-3P01733 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRBV12-3P01733 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRBV12-3P01733 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
TRBV12-3P01733 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
TRBV12-3P01733 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRBV12-3P01733 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRBV12-3P01733 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRBV12-3P01733 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRBV12-3P01733 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRBV12-3P01733 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRBV12-3P01733 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 BX640514.1-201ENST00000583223 1918 ntBASIC11.39□□□□□ -0.59
TRBV12-3P01733 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 MTX1P1-201ENST00000440904 838 ntBASIC11.39□□□□□ -0.59
TRBV12-3P01733 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 Z93015.1-201ENST00000451718 390 ntBASIC11.39□□□□□ -0.59
TRBV12-3P01733 CICP12-201ENST00000455801 843 ntBASIC11.39□□□□□ -0.59
TRBV12-3P01733 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 FAM86HP-204ENST00000513466 959 ntBASIC11.39□□□□□ -0.59
TRBV12-3P01733 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.39□□□□□ -0.59
TRBV12-3P01733 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRBV12-3P01733 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms