Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
GPC4O75487 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 LRRC59-203ENST00000576448 1531 ntBASIC14.86□□□□□ -0.03
GPC4O75487 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 AC041040.2-201ENST00000622926 2899 ntBASIC14.86□□□□□ -0.03
GPC4O75487 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
GPC4O75487 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
GPC4O75487 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GPC4O75487 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.85□□□□□ -0.03
GPC4O75487 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.85□□□□□ -0.03
GPC4O75487 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.85□□□□□ -0.03
GPC4O75487 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
GPC4O75487 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.85□□□□□ -0.03
GPC4O75487 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.85□□□□□ -0.03
GPC4O75487 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.85□□□□□ -0.03
GPC4O75487 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
GPC4O75487 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.85□□□□□ -0.03
GPC4O75487 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.85□□□□□ -0.03
GPC4O75487 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
GPC4O75487 SLC25A47P1-201ENST00000531577 414 ntBASIC14.85□□□□□ -0.03
GPC4O75487 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.85□□□□□ -0.03
GPC4O75487 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.85□□□□□ -0.03
GPC4O75487 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
GPC4O75487 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.85□□□□□ -0.03
GPC4O75487 AC008735.3-201ENST00000596646 500 ntBASIC14.85□□□□□ -0.03
GPC4O75487 AC012645.4-201ENST00000610691 1061 ntBASIC14.85□□□□□ -0.03
GPC4O75487 AC145423.3-201ENST00000615987 467 ntBASIC14.85□□□□□ -0.03
GPC4O75487 AC023090.2-201ENST00000625182 2110 ntBASIC14.85□□□□□ -0.03
GPC4O75487 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.85□□□□□ -0.03
GPC4O75487 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
GPC4O75487 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 AC136759.1-202ENST00000530858 2194 ntBASIC14.85□□□□□ -0.03
GPC4O75487 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 AC055811.4-201ENST00000624039 1754 ntBASIC14.85□□□□□ -0.03
GPC4O75487 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.85□□□□□ -0.03
GPC4O75487 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GPC4O75487 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.85□□□□□ -0.03
GPC4O75487 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.84□□□□□ -0.03
GPC4O75487 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GPC4O75487 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
GPC4O75487 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
GPC4O75487 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 AC005229.1-201ENST00000392885 409 ntBASIC14.84□□□□□ -0.03
GPC4O75487 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.84□□□□□ -0.03
GPC4O75487 TMEM14DP-201ENST00000422205 345 ntBASIC14.84□□□□□ -0.03
GPC4O75487 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 TTTY23B-201ENST00000442790 549 ntBASIC14.84□□□□□ -0.03
GPC4O75487 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 AC026434.2-201ENST00000506094 1078 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms