Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 AL136084.1-201ENST00000449172 318 ntBASIC6.34□□□□□ -1.39
USH2AO75445 AC009132.1-201ENST00000565194 320 ntBASIC6.34□□□□□ -1.39
USH2AO75445 AP005264.5-201ENST00000590066 467 ntBASIC6.34□□□□□ -1.39
USH2AO75445 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC6.34□□□□□ -1.39
USH2AO75445 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
USH2AO75445 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC6.34□□□□□ -1.39
USH2AO75445 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC6.34□□□□□ -1.39
USH2AO75445 RN7SL455P-201ENST00000580629 282 ntBASIC6.34□□□□□ -1.39
USH2AO75445 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 PSME3-213ENST00000592169 826 ntTSL 3 BASIC6.34□□□□□ -1.39
USH2AO75445 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 SSR4P1-203ENST00000599569 2260 ntBASIC6.34□□□□□ -1.39
USH2AO75445 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 AC022080.1-201ENST00000366255 781 ntBASIC6.34□□□□□ -1.39
USH2AO75445 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC6.34□□□□□ -1.39
USH2AO75445 PRDX3P2-201ENST00000447051 611 ntBASIC6.34□□□□□ -1.39
USH2AO75445 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 AC004801.1-201ENST00000549557 360 ntBASIC6.34□□□□□ -1.39
USH2AO75445 AL132994.1-201ENST00000554098 400 ntBASIC6.34□□□□□ -1.39
USH2AO75445 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
USH2AO75445 PMM2-216ENST00000569958 698 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
USH2AO75445 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 AC009093.10-201ENST00000641956 1442 ntBASIC6.34□□□□□ -1.39
USH2AO75445 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 CELP-203ENST00000624767 2414 ntTSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 PCDHA14-201ENST00000506751 2298 ntBASIC6.34□□□□□ -1.39
USH2AO75445 NKILA-202ENST00000614771 2598 ntBASIC6.34□□□□□ -1.39
USH2AO75445 NOC2LP2-201ENST00000407594 1944 ntBASIC6.34□□□□□ -1.39
USH2AO75445 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 RPSAP6-201ENST00000417882 882 ntBASIC6.34□□□□□ -1.39
USH2AO75445 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 DUX4L31-201ENST00000446466 1136 ntBASIC6.34□□□□□ -1.39
USH2AO75445 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC6.34□□□□□ -1.39
USH2AO75445 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC6.34□□□□□ -1.39
USH2AO75445 AC099552.4-201ENST00000624248 949 ntBASIC6.34□□□□□ -1.39
USH2AO75445 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
USH2AO75445 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
USH2AO75445 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
USH2AO75445 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC6.34□□□□□ -1.4
USH2AO75445 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC6.34□□□□□ -1.4
USH2AO75445 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
USH2AO75445 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 RNF7-202ENST00000393000 805 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 PSME2P2-201ENST00000453033 700 ntBASIC6.33□□□□□ -1.4
USH2AO75445 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 MIR6165-201ENST00000614803 84 ntBASIC6.33□□□□□ -1.4
USH2AO75445 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms