Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 ANKRD19P-201ENST00000338192 862 ntBASIC15.3■□□□□ 0.04
LRCH4O75427 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH4O75427 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 BOLA2P3-201ENST00000404566 256 ntBASIC15.3■□□□□ 0.04
LRCH4O75427 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH4O75427 AC112492.5-201ENST00000421897 457 ntBASIC15.3■□□□□ 0.04
LRCH4O75427 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 U91328.1-201ENST00000437528 223 ntBASIC15.3■□□□□ 0.04
LRCH4O75427 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.3■□□□□ 0.04
LRCH4O75427 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 HIST2H2BB-201ENST00000449108 381 ntBASIC15.3■□□□□ 0.04
LRCH4O75427 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH4O75427 CTBP2P5-201ENST00000454986 1264 ntBASIC15.3■□□□□ 0.04
LRCH4O75427 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.3■□□□□ 0.04
LRCH4O75427 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.3■□□□□ 0.04
LRCH4O75427 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH4O75427 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 AC027237.1-201ENST00000560942 655 ntBASIC15.3■□□□□ 0.04
LRCH4O75427 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.3■□□□□ 0.04
LRCH4O75427 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.3■□□□□ 0.04
LRCH4O75427 AL512343.1-201ENST00000605837 169 ntBASIC15.3■□□□□ 0.04
LRCH4O75427 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.3■□□□□ 0.04
LRCH4O75427 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRCH4O75427 AC027601.3-201ENST00000622907 509 ntBASIC15.3■□□□□ 0.04
LRCH4O75427 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH4O75427 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRCH4O75427 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH4O75427 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 MST1P2-201ENST00000457982 2291 ntBASIC15.29■□□□□ 0.04
LRCH4O75427 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 SHC1P1-201ENST00000425230 1745 ntBASIC15.29■□□□□ 0.04
LRCH4O75427 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.29■□□□□ 0.04
LRCH4O75427 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.29■□□□□ 0.04
LRCH4O75427 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 AL035414.1-201ENST00000451327 857 ntBASIC15.29■□□□□ 0.04
LRCH4O75427 KLF2P4-201ENST00000451959 1225 ntBASIC15.29■□□□□ 0.04
LRCH4O75427 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.29■□□□□ 0.04
LRCH4O75427 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.29■□□□□ 0.04
LRCH4O75427 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.29■□□□□ 0.04
LRCH4O75427 AP006547.1-201ENST00000563435 692 ntBASIC15.29■□□□□ 0.04
LRCH4O75427 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 AL136301.1-201ENST00000615830 422 ntBASIC15.29■□□□□ 0.04
LRCH4O75427 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRCH4O75427 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH4O75427 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH4O75427 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 TCAM1P-207ENST00000485295 1537 ntBASIC15.28■□□□□ 0.04
LRCH4O75427 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH4O75427 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms