Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CTNSO60931 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.8□□□□□ -0.2
CTNSO60931 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTNSO60931 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.8□□□□□ -0.2
CTNSO60931 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CTNSO60931 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.79□□□□□ -0.2
CTNSO60931 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 AC244394.1-201ENST00000435000 1665 ntBASIC13.79□□□□□ -0.2
CTNSO60931 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CTNSO60931 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.79□□□□□ -0.2
CTNSO60931 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.79□□□□□ -0.2
CTNSO60931 POM121L10P-201ENST00000436994 1285 ntBASIC13.79□□□□□ -0.2
CTNSO60931 AC012441.2-201ENST00000444843 739 ntBASIC13.79□□□□□ -0.2
CTNSO60931 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CTNSO60931 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.79□□□□□ -0.2
CTNSO60931 TUBB8P8-201ENST00000458717 1058 ntBASIC13.79□□□□□ -0.2
CTNSO60931 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.79□□□□□ -0.2
CTNSO60931 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.79□□□□□ -0.2
CTNSO60931 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.79□□□□□ -0.2
CTNSO60931 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.79□□□□□ -0.2
CTNSO60931 AC009884.2-201ENST00000603110 324 ntBASIC13.79□□□□□ -0.2
CTNSO60931 MIR6720-201ENST00000611664 98 ntBASIC13.79□□□□□ -0.2
CTNSO60931 AL023803.2-201ENST00000620080 638 ntBASIC13.79□□□□□ -0.2
CTNSO60931 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.79□□□□□ -0.2
CTNSO60931 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CTNSO60931 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CTNSO60931 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.79□□□□□ -0.2
CTNSO60931 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 AC015802.1-201ENST00000588104 1449 ntBASIC13.79□□□□□ -0.2
CTNSO60931 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.79□□□□□ -0.2
CTNSO60931 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.79□□□□□ -0.2
CTNSO60931 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTNSO60931 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CTNSO60931 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.78□□□□□ -0.2
CTNSO60931 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTNSO60931 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.78□□□□□ -0.2
CTNSO60931 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.78□□□□□ -0.2
CTNSO60931 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms